BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007H08LP1|AL425778
(749 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1655 1449 0.0
>3x_Contig1655
Length = 16228
Score = 1449 bits (731), Expect = 0.0
Identities = 748/751 (99%), Gaps = 2/751 (0%)
Strand = Plus / Minus
Query: 1 gatcttatgttagttacat-cttatt-cttttaaactattattcagaaactttcgtttat 58
|||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 15608 gatcttatgtcagttacatgcttatttcttttaaactattattcagaaactttcgtttat 15549
Query: 59 tttgttttcctagggttcatttcgaatgaaaagatgcgactacttttaaatagcttcaag 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15548 tttgttttcctagggttcatttcgaatgaaaagatgcgactacttttaaatagcttcaag 15489
Query: 119 tttgcatattccctttatcaaaagctcttgacaacacttctccaaggcaaccaccctacc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15488 tttgcatattccctttatcaaaagctcttgacaacacttctccaaggcaaccaccctacc 15429
Query: 179 attaactaggctggatgcatcatggaattcggctttactcttgatcaatactttggggtc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15428 attaactaggctggatgcatcatggaattcggctttactcttgatcaatactttggggtc 15369
Query: 239 tttaatttgaattttcaaagaaagtgactcaactgcattagatagcattgtttggttttg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15368 tttaatttgaattttcaaagaaagtgactcaactgcattagatagcattgtttggttttg 15309
Query: 299 ttccaagatatgcgtgagattgtgagatggatcacaaaaaactccgattgcatacgacca 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15308 ttccaagatatgcgtgagattgtgagatggatcacaaaaaactccgattgcatacgacca 15249
Query: 359 tttcaataccgaacgaccatgtaacaatattttaattgattcggataagaactgtccttc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15248 tttcaataccgaacgaccatgtaacaatattttaattgattcggataagaactgtccttc 15189
Query: 419 gatccacgatattcccaattctttttgaagtgtgaatattttggactctatagtaccggc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15188 gatccacgatattcccaattctttttgaagtgtgaatattttggactctatagtaccggc 15129
Query: 479 caatttaaggtccaaatctgacgaattttcatgtacaataaacattttataaccatctgt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15128 caatttaaggtccaaatctgacgaattttcatgtacaataaacattttataaccatctgt 15069
Query: 539 gaaccgttttgttattgacttattaattgtgttatctttcttttcattttggaatttaca 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15068 gaaccgttttgttattgacttattaattgtgttatctttcttttcattttggaatttaca 15009
Query: 599 cacatagttgtcggtatgtatggcccacttcccatcgcaaatccaacaaaactcggaatg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15008 cacatagttgtcggtatgtatggcccacttcccatcgcaaatccaacaaaactcggaatg 14949
Query: 659 gcagctctgacatgtcatatggttgcaacctccgtttttctctatactagtaccgcagaa 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14948 gcagctctgacatgtcatatggttgcaacctccgtttttctctatactagtaccgcagaa 14889
Query: 719 cgggcatggcttggtgttgtttaatatccaa 749
|||||||||||||||||||||||||||||||
Sbjct: 14888 cgggcatggcttggtgttgtttaatatccaa 14858
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6537
Number of Sequences: 1807
Number of extensions: 6537
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 749
length of database: 10,358,551
effective HSP length: 16
effective length of query: 733
effective length of database: 10,329,639
effective search space: 7571625387
effective search space used: 7571625387
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)